EnhancerDB
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  3. rs4074196[chr1:1611995]
Enhancers that have rs4074196[chr1:1611995]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 1607365 1622353 enh2
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1)
chr1 1611804 1612115 vista43
VISTA
Transcript factors that have rs4074196[chr1:1611995]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 1611661 1612110 TCF7L2 GTRD no Colon (HCT116) 107801795
chr1 1611984 1612004 ESR1 JASPAR yes 26198131
chr1 1611984 1612004 ESR1 JASPAR yes 118215091
chr1 1611988 1612005 ESR1 JASPAR yes 26198132
chr1 1611988 1612005 ESR1 JASPAR yes 118215092
Genes associated with rs4074196[chr1:1611995], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More