EnhancerDB
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  3. rs4131769[chr12:50952022]
Enhancers that have rs4131769[chr12:50952022]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 50906745 50954311 enh2346
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4131769[chr12:50952022]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 50952013 50952023 HOXA13 JASPAR yes 120843623
chr12 50952013 50952023 HOXB13 JASPAR yes 120843624
chr12 50952013 50952023 HOXD13 JASPAR yes 120843625
chr12 50952013 50952024 HOXA10 JASPAR yes 120843626
chr12 50952014 50952023 CDX1 JASPAR yes 120843627
chr12 50952014 50952025 CDX2 JASPAR yes 120843628
Genes associated with rs4131769[chr12:50952022], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More