EnhancerDB
  1. Home
  2. SNP
  3. rs41346650[chr17:57439409]
Enhancers that have rs41346650[chr17:57439409]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57433402 57461748 enh17258
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs41346650[chr17:57439409]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57439403 57439423 TBX19 JASPAR yes 55052303
chr17 57439404 57439411 MEIS1 JASPAR yes 55052304
chr17 57439406 57439416 MYF6 JASPAR yes 55052305
chr17 57439408 57439413 MYC TRANSFAC yes 55052306
Genes associated with rs41346650[chr17:57439409], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 56597611 56618179 - SEPT4 ENSG00000108387.10 56618179 821230 Heart 0.318118 16091