EnhancerDB
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  3. rs41527448[chr1:229339710]
Enhancers that have rs41527448[chr1:229339710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 229330645 229348935 enh12763
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Brain (SK-N-MC) Stomach Muscle (A673) Placenta Uterus Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs41527448[chr1:229339710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 21390628
chr1 229339279 229340132 ZNF143 GTRD no Epithelial (MCF-7) 107877844
chr1 229339388 229339990 GATA3 GTRD no Thymus 21390632
chr1 229339388 229339990 GATA3 GTRD no Thymus 107877857
chr1 229339402 229340162 ZNF143 GTRD no Epithelial (MCF-7) 21390633
chr1 229339402 229340162 ZNF143 GTRD no Epithelial (MCF-7) 107877858
chr1 229339489 229339964 ZNF274 GTRD no Cervix (HeLa-S3) 21390634
chr1 229339489 229339964 ZNF274 GTRD no Cervix (HeLa-S3) 107877859
chr1 229339553 229339957 ZNF274 GTRD no Bone Marrow (K562) 107877860
chr1 229339580 229339923 ZNF143 GTRD no Epithelial (MCF-7) 21390635
chr1 229339704 229339716 IRF1 JASPAR yes 35973922
chr1 229339706 229339721 FOXP1 JASPAR yes 35973923
Genes associated with rs41527448[chr1:229339710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More