EnhancerDB
  1. Home
  2. SNP
  3. rs4238830[chr16:89540241]
Enhancers that have rs4238830[chr16:89540241]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89534745 89554855 enh32031
Liver Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs4238830[chr16:89540241]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89540237 89540242 ATF1 TRANSFAC yes 12348254
chr16 89540237 89540254 RXRA JASPAR yes 12348255
Genes associated with rs4238830[chr16:89540241], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More