EnhancerDB
  1. Home
  2. SNP
  3. rs424275[chr5:14208542]
Enhancers that have rs424275[chr5:14208542]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 14197965 14242825 enh22053
Brain (SK-N-MC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs424275[chr5:14208542]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 14208256 14208565 RUNX3 UCSC Txn Factor no Conserved 108534431
chr5 14208528 14208542 TLX1 JASPAR yes 61023678
chr5 14208529 14208543 TLX1 JASPAR yes 61023679
chr5 14208529 14208544 JUND JASPAR yes 61023680
chr5 14208530 14208543 JUN JASPAR yes 61023681
chr5 14208531 14208544 ATF4 JASPAR yes 61023682
chr5 14208534 14208545 DUX4 JASPAR yes 61023683
chr5 14208540 14208544 YY1 TRANSFAC yes 61023684
chr5 14208540 14208555 STAT1 JASPAR yes 61023685
Genes associated with rs424275[chr5:14208542], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More