EnhancerDB
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  3. rs428608[chr1:55031503]
Enhancers that have rs428608[chr1:55031503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs428608[chr1:55031503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55031494 55031509 FOXP1 JASPAR yes 28993073
chr1 55031495 55031506 FOXA1 JASPAR yes 28993074
chr1 55031495 55031510 FOXA1 JASPAR yes 28993075
chr1 55031496 55031508 FOXC2 JASPAR yes 28993076
chr1 55031503 55031509 SOX10 JASPAR yes 28993077
Genes associated with rs428608[chr1:55031503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More