EnhancerDB
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  3. rs4312840[chr5:179194538]
Enhancers that have rs4312840[chr5:179194538]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179185005 179195695 enh8908
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Blood (T-cell) Brain (SK-N-SH) Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Thyroid Peripheral Blood (MM.1S) Uterus Blood (Karpas-422) Lung (PC-9) Breast Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs4312840[chr5:179194538]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179194526 179194541 MEF2C JASPAR yes 68189144
chr5 179194526 179194547 IRF1 JASPAR yes 68189145
chr5 179194529 179194543 IRF7 JASPAR yes 68189146
chr5 179194531 179194543 IRF1 JASPAR yes 68189147
chr5 179194532 179194553 IRF1 JASPAR yes 68189148
chr5 179194536 179194551 PRDM1 JASPAR yes 68189149
Genes associated with rs4312840[chr5:179194538], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More