EnhancerDB
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  3. rs4359307[chr13:111039784]
Enhancers that have rs4359307[chr13:111039784]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4359307[chr13:111039784]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111039355 111039933 ZNF274 GTRD no Bone Marrow (K562) 108089316
chr13 111039603 111040218 ZNF274 GTRD no Bone Marrow (K562) 108089317
chr13 111039632 111040401 ZNF274 GTRD no Bone Marrow (K562) 108089318
chr13 111039660 111040055 ZNF274 GTRD no Bone Marrow (K562) 108089319
chr13 111039662 111040148 ZNF274 GTRD no Bone Marrow (K562) 108089320
chr13 111039713 111040287 ZNF274 GTRD no Bone Marrow (K562) 108089321
chr13 111039780 111039790 GCM2 JASPAR yes 60346225
chr13 111039784 111039803 RFX2 JASPAR yes 60346226
Genes associated with rs4359307[chr13:111039784], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr13 111521578 111522162 - LINC00346 ENSG00000255874.1 111522162 481794 Lung 0.203841 13025