EnhancerDB
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  3. rs4390613[chr16:11422836]
Enhancers that have rs4390613[chr16:11422836]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11415474 11429815 enh3885
Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Stomach Kidney Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Muscle (A673)
Transcript factors that have rs4390613[chr16:11422836]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11422225 11422881 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108181562
chr16 11422298 11422878 ATF2 UCSC Txn Factor no Conserved 108181566
chr16 11422298 11422878 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181567
chr16 11422302 11422838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690627
chr16 11422302 11422838 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181568
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 21690631
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 108181574
chr16 11422352 11423123 ZNF274 GTRD no Blood (GM12878) 108181575
chr16 11422387 11422932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690636
chr16 11422387 11422932 NFIC UCSC Txn Factor no Conserved 108181585
chr16 11422387 11422932 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181586
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690639
chr16 11422399 11423174 RUNX3 UCSC Txn Factor no Conserved 108181589
chr16 11422399 11423174 RUNX3 UCSC Txn Factor no Conserved 108181590
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181591
chr16 11422399 11423174 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181592
chr16 11422419 11422865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690644
chr16 11422419 11422865 FOXM1 UCSC Txn Factor no Conserved 108181599
chr16 11422419 11422865 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181600
chr16 11422424 11422878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690646
chr16 11422424 11422878 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181607
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 21690661
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181637
chr16 11422510 11424641 ZNF143 GTRD no Epithelial (MCF-7) 108181638
chr16 11422538 11423154 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181644
chr16 11422538 11423154 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108181645
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690666
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181646
chr16 11422543 11423133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181647
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 21690668
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181649
chr16 11422617 11424568 ZNF143 GTRD no Epithelial (MCF-7) 108181650
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 21690669
chr16 11422670 11425487 ZNF143 GTRD no Epithelial (MCF-7) 108181651
chr16 11422737 11423173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690670
chr16 11422737 11423173 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181652
chr16 11422746 11423182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21690671
chr16 11422746 11423182 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108181653
chr16 11422823 11422836 SMAD2 JASPAR yes 9506186
chr16 11422827 11422847 RREB1 JASPAR yes 9506187
chr16 11422828 11422836 TBX15 JASPAR yes 9506188
chr16 11422835 11422838 MYB TRANSFAC yes 9506189
chr16 11422836 11422856 RREB1 JASPAR yes 9506190
Genes associated with rs4390613[chr16:11422836], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More