EnhancerDB
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  3. rs439416[chr2:33295631]
Enhancers that have rs439416[chr2:33295631]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 33282385 33305251 enh18430
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Lung (PC-9) Esophagus Astrocyte Liver Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
chr2 33295461 33295712 vista30938
VISTA
Transcript factors that have rs439416[chr2:33295631]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 33295009 33295657 GABPA UCSC Txn Factor no Conserved 108431717
chr2 33295520 33295827 STAT3 UCSC Txn Factor no Conserved 108431719
chr2 33295620 33295640 TP53 JASPAR yes 22029473
chr2 33295620 33295640 TP53 JASPAR yes 72893792
chr2 33295623 33295641 TP53 JASPAR yes 22029474
chr2 33295623 33295641 TP73 JASPAR yes 22029475
chr2 33295623 33295641 TP53 JASPAR yes 72893793
chr2 33295623 33295641 TP73 JASPAR yes 72893794
chr2 33295624 33295639 TP53 JASPAR yes 22029476
chr2 33295624 33295639 TP53 JASPAR yes 72893795
chr2 33295625 33295640 TP53 JASPAR yes 22029477
chr2 33295625 33295640 TP53 JASPAR yes 72893796
chr2 33295627 33295637 SMAD3 JASPAR yes 22029478
chr2 33295627 33295637 SMAD3 JASPAR yes 72893797
Genes associated with rs439416[chr2:33295631], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More