EnhancerDB
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  3. rs4394606[chr1:22279815]
Enhancers that have rs4394606[chr1:22279815]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22279705 22295955 enh11595
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Placenta Breast Lung (PC-9) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs4394606[chr1:22279815]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22279801 22279816 TFAP2A JASPAR yes 27335611
chr1 22279801 22279816 TFAP2C JASPAR yes 27335612
chr1 22279804 22279815 TFAP2A JASPAR yes 27335613
chr1 22279804 22279816 TFAP2A JASPAR yes 27335614
chr1 22279804 22279816 TFAP2B JASPAR yes 27335615
chr1 22279804 22279816 TFAP2C JASPAR yes 27335616
chr1 22279810 22279828 ESR1 JASPAR yes 27335617
Genes associated with rs4394606[chr1:22279815], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More