EnhancerDB
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  3. rs4399227[chr1:211793554]
Enhancers that have rs4399227[chr1:211793554]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 211772625 211795095 enh907
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4399227[chr1:211793554]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 211793551 211793563 HES5 JASPAR yes 35072231
chr1 211793552 211793562 BHLHE40 JASPAR yes 35072232
chr1 211793552 211793562 CLOCK JASPAR yes 35072233
chr1 211793552 211793562 HEY1 JASPAR yes 35072234
chr1 211793552 211793562 MAX JASPAR yes 35072235
chr1 211793552 211793562 MNT JASPAR yes 35072236
chr1 211793554 211793559 MYC TRANSFAC yes 35072237
chr1 211793554 211793559 USF1 TRANSFAC yes 35072238
chr1 211793554 211793559 USF2 TRANSFAC yes 35072239
Genes associated with rs4399227[chr1:211793554], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More