EnhancerDB
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  3. rs445406[chr5:172162906]
Enhancers that have rs445406[chr5:172162906]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172156284 172181075 enh22815
Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs445406[chr5:172162906]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172162898 172162915 PAX1 JASPAR yes 67819798
chr5 172162898 172162915 PAX9 JASPAR yes 67819799
chr5 172162900 172162914 PAX6 JASPAR yes 67819800
chr5 172162902 172162916 PAX6 JASPAR yes 67819801
chr5 172162905 172162919 POU4F1 JASPAR yes 67819802
chr5 172162905 172162921 POU4F2 JASPAR yes 67819803
chr5 172162905 172162921 POU4F3 JASPAR yes 67819804
Genes associated with rs445406[chr5:172162906], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More