EnhancerDB
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  3. rs4540925[chr12:125385507]
Enhancers that have rs4540925[chr12:125385507]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs4540925[chr12:125385507]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125385241 125385813 ZNF274 GTRD no Liver (HepG2) 21583289
chr12 125385348 125385610 ZNF274 GTRD no Liver (HepG2) 21583290
chr12 125385365 125385590 ZNF274 GTRD no Liver (HepG2) 21583291
chr12 125385382 125385639 ZNF274 GTRD no Liver (HepG2) 21583292
chr12 125385498 125385507 ZEB1 JASPAR yes 124431279
chr12 125385506 125385520 FOXF2 JASPAR yes 124431281
Genes associated with rs4540925[chr12:125385507], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More