EnhancerDB
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  3. rs4555010[chr13:111049838]
Enhancers that have rs4555010[chr13:111049838]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 111037685 111076655 enh15498
Brain (SK-N-MC) Liver Pancreas Uterus Kidney Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4555010[chr13:111049838]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 111049518 111051606 ZNF143 GTRD no Epithelial (MCF-7) 21605208
chr13 111049518 111051606 ZNF143 GTRD no Epithelial (MCF-7) 108089338
chr13 111049568 111051707 ZNF143 GTRD no Epithelial (MCF-7) 21605209
chr13 111049568 111051707 ZNF143 GTRD no Epithelial (MCF-7) 108089339
chr13 111049778 111050002 CEBPB UCSC Txn Factor no Conserved 108089340
chr13 111049810 111051034 ZBTB33 GTRD no Lung (A549) 108089341
chr13 111049828 111050411 ZNF143 GTRD no Epithelial (MCF-7) 21605210
chr13 111049828 111050411 ZNF143 GTRD no Epithelial (MCF-7) 108089342
chr13 111049828 111050687 ZBTB33 GTRD no Lung (A549) 108089343
chr13 111049831 111049845 FOXF2 JASPAR yes 60347599
chr13 111049833 111049843 HOXA13 JASPAR yes 60347600
chr13 111049833 111049843 HOXB13 JASPAR yes 60347601
chr13 111049833 111049843 HOXD13 JASPAR yes 60347602
chr13 111049834 111049846 POU3F1 JASPAR yes 60347603
chr13 111049836 111049844 FOXG1 JASPAR yes 60347604
Genes associated with rs4555010[chr13:111049838], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More