EnhancerDB
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  3. rs4555324[chr2:38380942]
Enhancers that have rs4555324[chr2:38380942]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 38370585 38382295 enh18455
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Placenta Colon (HCT116) Breast Uterus Muscle (Myoblast) Pancreas Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
chr2 38380770 38381135 vista31092
VISTA
Transcript factors that have rs4555324[chr2:38380942]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 38380942 38380951 VENTX JASPAR yes 22037239
chr2 38380942 38380951 VENTX JASPAR yes 73115004
chr2 38380942 38380952 GBX2 JASPAR yes 22037240
chr2 38380942 38380952 GSX2 JASPAR yes 22037241
chr2 38380942 38380952 HOXB3 JASPAR yes 22037242
chr2 38380942 38380952 MNX1 JASPAR yes 22037243
chr2 38380942 38380952 RAX JASPAR yes 22037244
chr2 38380942 38380952 GBX2 JASPAR yes 73115005
chr2 38380942 38380952 GSX2 JASPAR yes 73115006
chr2 38380942 38380952 HOXB3 JASPAR yes 73115007
chr2 38380942 38380952 MNX1 JASPAR yes 73115008
chr2 38380942 38380952 RAX JASPAR yes 73115009
chr2 38380942 38380953 HOXA10 JASPAR yes 22037245
chr2 38380942 38380953 HOXA10 JASPAR yes 73115010
Genes associated with rs4555324[chr2:38380942], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More