EnhancerDB
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  3. rs4598554[chr1:204260821]
Enhancers that have rs4598554[chr1:204260821]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4598554[chr1:204260821]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204260815 204260831 POU4F2 JASPAR yes 34689103
chr1 204260817 204260821 YY1 TRANSFAC yes 34689104
chr1 204260818 204260829 CDX2 JASPAR yes 34689105
Genes associated with rs4598554[chr1:204260821], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More