EnhancerDB
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  3. rs4602089[chr17:78723985]
Enhancers that have rs4602089[chr17:78723985]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs4602089[chr17:78723985]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 21797104
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307176
chr17 78721095 78730813 ZNF274 GTRD no Blood (GM12878) 108307177
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 21797105
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307178
chr17 78722023 78728349 ZNF274 GTRD no Blood (GM12878) 108307179
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 21797106
chr17 78722155 78724945 ZNF274 GTRD no Blood (GM12878) 108307180
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 21797107
chr17 78722992 78724924 ZBTB33 GTRD no Brain (SK-N-SH) 108307181
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 21797108
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 108307182
chr17 78723605 78726272 ZNF274 GTRD no Blood (GM12878) 108307183
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 21797109
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 108307184
chr17 78723684 78726307 ZNF274 GTRD no Blood (GM12878) 108307185
chr17 78723855 78725090 ZNF274 GTRD no Blood (GM12878) 21797110
chr17 78723855 78725090 ZNF274 GTRD no Blood (GM12878) 108307186
chr17 78723976 78723991 RUNX2 JASPAR yes 56274885
chr17 78723977 78723986 RUNX2 JASPAR yes 56274886
chr17 78723977 78723987 RUNX3 JASPAR yes 56274887
chr17 78723981 78723996 SOX21 JASPAR yes 56274888
chr17 78723981 78723997 SOX4 JASPAR yes 56274889
Genes associated with rs4602089[chr17:78723985], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More