EnhancerDB
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  3. rs4620599[chr1:203625726]
Enhancers that have rs4620599[chr1:203625726]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203594185 203628195 enh12562
Bone Marrow (K562) Astrocyte Colon (HCT116) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4620599[chr1:203625726]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 21369748
chr1 203625139 203628299 ZNF274 GTRD no Bone Marrow (K562) 107859243
chr1 203625164 203627219 ZNF143 GTRD no Epithelial (MCF-7) 21369749
chr1 203625164 203627219 ZNF143 GTRD no Epithelial (MCF-7) 107859244
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 21369750
chr1 203625167 203627433 ZNF143 GTRD no Epithelial (MCF-7) 107859245
chr1 203625716 203625731 HNF1A JASPAR yes 34651873
chr1 203625717 203625727 POU6F1 JASPAR yes 34651874
chr1 203625717 203625730 HNF1B JASPAR yes 34651875
chr1 203625718 203625730 HNF1B JASPAR yes 34651876
chr1 203625726 203625729 MYB TRANSFAC yes 34651877
Genes associated with rs4620599[chr1:203625726], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More