EnhancerDB
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  3. rs4648625[chr1:2200341]
Enhancers that have rs4648625[chr1:2200341]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 2194994 2213473 enh11424
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Muscle (Myoblast) Muscle (Myotube) Lung Muscle (A673) Heart
Transcript factors that have rs4648625[chr1:2200341]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 2200339 2200360 IRF1 JASPAR yes 26229542
chr1 2200339 2200360 ZNF263 JASPAR yes 26229543
chr1 2200341 2200356 PRDM1 JASPAR yes 26229544
Genes associated with rs4648625[chr1:2200341], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More