EnhancerDB
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  3. rs4649015[chr1:25032605]
Enhancers that have rs4649015[chr1:25032605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25026945 25066186 enh139
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4649015[chr1:25032605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25017364 25039918 ZNF274 GTRD no Blood (GM12878) 21325292
chr1 25032595 25032616 IRF1 JASPAR yes 27520743
chr1 25032597 25032612 IRF9 JASPAR yes 27520744
chr1 25032598 25032612 IRF7 JASPAR yes 27520745
chr1 25032598 25032612 IRF8 JASPAR yes 27520746
chr1 25032599 25032613 STAT1 JASPAR yes 27520747
chr1 25032599 25032614 STAT2 JASPAR yes 27520748
chr1 25032600 25032612 IRF1 JASPAR yes 27520749
Genes associated with rs4649015[chr1:25032605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More