EnhancerDB
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  3. rs4652347[chr1:179002969]
Enhancers that have rs4652347[chr1:179002969]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 178994785 179010519 enh771
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Astrocyte Lung Blood (OCI-LY7) Blood (GM12878) Adrenal Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Blood (T-cell) Stomach
Transcript factors that have rs4652347[chr1:179002969]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 179002968 179002980 HES5 JASPAR yes 33462315
chr1 179002968 179002980 HES7 JASPAR yes 33462316
chr1 179002968 179002980 PKNOX2 JASPAR yes 33462317
chr1 179002968 179002988 TP63 JASPAR yes 33462318
chr1 179002969 179002987 TP53 JASPAR yes 33462319
chr1 179002969 179002987 TP73 JASPAR yes 33462320
Genes associated with rs4652347[chr1:179002969], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 178994939 179045697 + FAM20B ENSG00000116199.7 178994939 0 Esophagus 0.0598385 1604
chr1 178994939 179045697 + FAM20B ENSG00000116199.7 178994939 0 Esophagus 5.7863e-09 1604