EnhancerDB
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  3. rs4652566[chr1:181109244]
Enhancers that have rs4652566[chr1:181109244]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181093745 181114755 enh791
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4652566[chr1:181109244]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181107215 181114093 ZNF143 GTRD no Epithelial (MCF-7) 21356118
chr1 181107215 181114093 ZNF143 GTRD no Epithelial (MCF-7) 107849439
chr1 181108850 181109246 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21356145
chr1 181109087 181109343 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21356149
chr1 181109206 181109479 ZNF274 GTRD no Liver (HepG2) 21356150
Genes associated with rs4652566[chr1:181109244], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More