EnhancerDB
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  3. rs4653499[chr1:223892703]
Enhancers that have rs4653499[chr1:223892703]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 223892678 223892997 vista5270
VISTA
Transcript factors that have rs4653499[chr1:223892703]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223892496 223893092 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21383856
chr1 223892496 223893092 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107873032
chr1 223892645 223892922 SOX2 GTRD no Neural Stem Cells (H9) 107873033
chr1 223892697 223892708 FLI1 JASPAR yes 35670064
chr1 223892697 223892708 FLI1 JASPAR yes 118466661
chr1 223892698 223892713 STAT1 JASPAR yes 35670065
chr1 223892698 223892713 STAT1 JASPAR yes 118466662
chr1 223892699 223892707 EHF JASPAR yes 35670066
chr1 223892699 223892707 EHF JASPAR yes 118466663
chr1 223892700 223892711 STAT1 JASPAR yes 35670067
chr1 223892700 223892711 STAT3 JASPAR yes 35670068
chr1 223892700 223892711 STAT1 JASPAR yes 118466664
chr1 223892700 223892711 STAT3 JASPAR yes 118466665
chr1 223892700 223892715 RFX5 JASPAR yes 35670069
chr1 223892700 223892715 RFX5 JASPAR yes 118466666
Genes associated with rs4653499[chr1:223892703], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More