EnhancerDB
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  3. rs4653671[chr1:225959328]
Enhancers that have rs4653671[chr1:225959328]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225938095 225960315 enh12725
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4653671[chr1:225959328]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225959324 225959332 TBX5 JASPAR yes 35770327
chr1 225959324 225959333 ZEB1 JASPAR yes 35770328
chr1 225959324 225959337 ZBTB18 JASPAR yes 35770329
chr1 225959325 225959335 ID4 JASPAR yes 35770330
chr1 225959325 225959335 TCF3 JASPAR yes 35770331
chr1 225959325 225959335 TCF4 JASPAR yes 35770332
chr1 225959327 225959332 USF2 TRANSFAC yes 35770333
Genes associated with rs4653671[chr1:225959328], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More