EnhancerDB
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  3. rs4653829[chr1:223893433]
Enhancers that have rs4653829[chr1:223893433]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4653829[chr1:223893433]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223893429 223893442 ELF1 JASPAR yes 35670141
chr1 223893431 223893442 ELF5 JASPAR yes 35670142
chr1 223893431 223893442 ETV2 JASPAR yes 35670143
chr1 223893432 223893442 ERF JASPAR yes 35670144
chr1 223893432 223893442 ERG JASPAR yes 35670145
chr1 223893432 223893442 ETS1 JASPAR yes 35670146
chr1 223893432 223893442 FLI1 JASPAR yes 35670147
chr1 223893432 223893442 GABPA JASPAR yes 35670148
chr1 223893432 223893443 ELK4 JASPAR yes 35670149
chr1 223893432 223893443 FLI1 JASPAR yes 35670150
Genes associated with rs4653829[chr1:223893433], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More