EnhancerDB
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  3. rs4653836[chr1:223887895]
Enhancers that have rs4653836[chr1:223887895]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4653836[chr1:223887895]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223887535 223888828 ZNF274 GTRD no Cervix (HeLa-S3) 21383814
chr1 223887545 223888792 ZNF274 GTRD no Cervix (HeLa-S3) 21383815
chr1 223887620 223888873 ZNF274 GTRD no Cervix (HeLa-S3) 21383816
chr1 223887658 223888863 ZNF274 GTRD no Cervix (HeLa-S3) 21383817
chr1 223887713 223888525 ZNF274 GTRD no Cervix (HeLa-S3) 21383818
chr1 223887715 223888622 ZNF274 GTRD no Cervix (HeLa-S3) 21383819
chr1 223887724 223888867 ZNF274 GTRD no Cervix (HeLa-S3) 21383820
chr1 223887742 223888732 ZNF274 GTRD no Cervix (HeLa-S3) 21383821
chr1 223887745 223888612 ZNF274 GTRD no Cervix (HeLa-S3) 21383822
chr1 223887747 223888670 ZNF274 GTRD no Cervix (HeLa-S3) 21383823
chr1 223887756 223888897 ZNF274 GTRD no Cervix (HeLa-S3) 21383824
chr1 223887797 223888731 ZNF274 GTRD no Cervix (HeLa-S3) 21383825
chr1 223887821 223888652 ZNF274 GTRD no Cervix (HeLa-S3) 21383826
chr1 223887836 223888706 ZBTB33 GTRD no Brain (SK-N-SH) 21383827
chr1 223887889 223887901 E2F1 JASPAR yes 35669224
chr1 223887890 223887901 E2F1 JASPAR yes 35669225
chr1 223887891 223887905 PLAG1 JASPAR yes 35669226
Genes associated with rs4653836[chr1:223887895], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More