EnhancerDB
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  3. rs4654773[chr1:22252262]
Enhancers that have rs4654773[chr1:22252262]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 22216373 22262695 enh11593
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs4654773[chr1:22252262]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 22252258 22252273 FOXP1 JASPAR yes 27333034
chr1 22252261 22252272 FOXP2 JASPAR yes 27333035
chr1 22252262 22252270 FOXO3 JASPAR yes 27333036
Genes associated with rs4654773[chr1:22252262], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 22962999 22966101 + C1QA ENSG00000173372.12 22962999 710737 Breast 0.198093 301