EnhancerDB
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  3. rs4660143[chr1:236163299]
Enhancers that have rs4660143[chr1:236163299]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 236157785 236169575 enh12809
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Heart
Transcript factors that have rs4660143[chr1:236163299]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 236162898 236163308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21404241
chr1 236162898 236163308 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107886703
chr1 236162911 236163377 ZNF274 GTRD no Liver (HepG2) 107886704
chr1 236162988 236164681 ZNF274 GTRD no Blood (GM12878) 21404242
chr1 236162988 236164681 ZNF274 GTRD no Blood (GM12878) 107886705
chr1 236163016 236163431 ZNF274 GTRD no Liver (HepG2) 107886706
chr1 236163025 236164634 ZNF274 GTRD no Blood (GM12878) 21404243
chr1 236163025 236164634 ZNF274 GTRD no Blood (GM12878) 107886707
chr1 236163043 236163364 ZNF274 GTRD no Liver (HepG2) 107886708
chr1 236163087 236164514 ZNF274 GTRD no Blood (GM12878) 21404244
chr1 236163087 236164514 ZNF274 GTRD no Blood (GM12878) 107886709
chr1 236163091 236163558 ZNF274 GTRD no Liver (HepG2) 107886710
chr1 236163093 236164089 ZNF274 GTRD no Blood (GM12878) 21404245
chr1 236163093 236164089 ZNF274 GTRD no Blood (GM12878) 107886711
chr1 236163094 236164467 ZNF274 GTRD no Blood (GM12878) 21404246
chr1 236163094 236164467 ZNF274 GTRD no Blood (GM12878) 107886712
chr1 236163130 236164354 ZNF274 GTRD no Blood (GM12878) 21404247
chr1 236163130 236164354 ZNF274 GTRD no Blood (GM12878) 107886713
chr1 236163150 236163814 ZNF274 GTRD no Blood (GM12878) 21404248
chr1 236163150 236163814 ZNF274 GTRD no Blood (GM12878) 107886714
chr1 236163295 236163308 NR2F1 JASPAR yes 36395421
chr1 236163296 236163304 CREB1 JASPAR yes 36395422
chr1 236163299 236163303 ESR1 TRANSFAC yes 36395423
Genes associated with rs4660143[chr1:236163299], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 236139130 236228462 - NID1 ENSG00000116962.10 236228462 0 Esophagus 0.191698 1973