EnhancerDB
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  3. rs4661720[chr1:16506095]
Enhancers that have rs4661720[chr1:16506095]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4661720[chr1:16506095]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16506081 16506102 IRF1 JASPAR yes 27031942
chr1 16506087 16506102 FOXP1 JASPAR yes 27031943
chr1 16506087 16506102 MEF2C JASPAR yes 27031944
chr1 16506089 16506104 FOXP1 JASPAR yes 27031945
chr1 16506092 16506102 HOXA13 JASPAR yes 27031946
chr1 16506092 16506102 HOXB13 JASPAR yes 27031947
chr1 16506092 16506102 HOXD13 JASPAR yes 27031948
chr1 16506092 16506103 HOXA10 JASPAR yes 27031949
chr1 16506093 16506102 CDX1 JASPAR yes 27031950
chr1 16506093 16506104 CDX2 JASPAR yes 27031951
chr1 16506094 16506106 MEF2A JASPAR yes 27031952
chr1 16506094 16506106 MEF2B JASPAR yes 27031953
chr1 16506094 16506106 MEF2D JASPAR yes 27031954
Genes associated with rs4661720[chr1:16506095], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More