EnhancerDB
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  3. rs4661721[chr1:16514369]
Enhancers that have rs4661721[chr1:16514369]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4661721[chr1:16514369]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16514361 16514370 THAP1 JASPAR yes 27033255
chr1 16514362 16514380 NFYA JASPAR yes 27033256
Genes associated with rs4661721[chr1:16514369], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 16558195 16563657 - RSG1 ENSG00000132881.7 16563657 43826 Ovary 0.401735 228