EnhancerDB
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  3. rs4666116[chr2:28933408]
Enhancers that have rs4666116[chr2:28933408]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs4666116[chr2:28933408]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28933394 28933409 FOXP1 JASPAR yes 72672146
chr2 28933395 28933408 POU2F2 JASPAR yes 72672147
chr2 28933397 28933418 IRF1 JASPAR yes 72672148
chr2 28933400 28933414 IRF8 JASPAR yes 72672149
chr2 28933401 28933415 STAT1 JASPAR yes 72672150
chr2 28933401 28933416 STAT2 JASPAR yes 72672151
Genes associated with rs4666116[chr2:28933408], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More