EnhancerDB
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  3. rs4686540[chr3:190066711]
Enhancers that have rs4686540[chr3:190066711]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 190060801 190067455 enh21220
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Lung (A549) Muscle (A673) Placenta Thyroid Pancreas (Panc1) Uterus Stomach
Transcript factors that have rs4686540[chr3:190066711]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 190066694 190066712 TP63 JASPAR yes 8645495
chr3 190066705 190066726 IRF1 JASPAR yes 8645496
chr3 190066707 190066722 STAT2 JASPAR yes 8645497
chr3 190066709 190066723 IRF7 JASPAR yes 8645498
chr3 190066709 190066723 IRF8 JASPAR yes 8645499
chr3 190066709 190066724 IRF9 JASPAR yes 8645500
chr3 190066711 190066732 IRF1 JASPAR yes 8645501
Genes associated with rs4686540[chr3:190066711], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More