EnhancerDB
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  3. rs475210[chr1:201690545]
Enhancers that have rs475210[chr1:201690545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201670008 201708415 enh12526
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs475210[chr1:201690545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201690544 201690560 RFX2 JASPAR yes 34524416
chr1 201690544 201690560 RFX3 JASPAR yes 34524417
chr1 201690544 201690560 RFX4 JASPAR yes 34524418
Genes associated with rs475210[chr1:201690545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 201857808 201861434 + SHISA4 ENSG00000198892.6 201857808 167263 Pancreas 0.0104727 1712