EnhancerDB
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  3. rs4762072[chr12:52609935]
Enhancers that have rs4762072[chr12:52609935]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52591245 52620175 enh14727
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4762072[chr12:52609935]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52609425 52609936 GATA3 UCSC Txn Factor no Conserved 108033730
chr12 52609456 52610006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546798
chr12 52609456 52610006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108033741
chr12 52609628 52610012 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546806
chr12 52609628 52610012 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108033750
chr12 52609804 52610321 REST UCSC Txn Factor no Conserved 108033751
chr12 52609804 52610321 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108033752
chr12 52609922 52609936 RORA JASPAR yes 120929172
Genes associated with rs4762072[chr12:52609935], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More