EnhancerDB
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  3. rs478225[chr1:55042757]
Enhancers that have rs478225[chr1:55042757]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 55021705 55049987 enh11873
Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs478225[chr1:55042757]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 55042744 55042758 POU1F1 JASPAR yes 28994712
chr1 55042745 55042757 POU3F2 JASPAR yes 28994713
chr1 55042745 55042758 POU3F3 JASPAR yes 28994714
Genes associated with rs478225[chr1:55042757], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More