EnhancerDB
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  3. rs4782697[chr16:85349539]
Enhancers that have rs4782697[chr16:85349539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4782697[chr16:85349539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85348182 85350187 ZBTB33 GTRD no Brain (SK-N-SH) 21723235
chr16 85348682 85350032 ZBTB33 GTRD no Brain (SK-N-SH) 21723240
chr16 85348716 85351726 ZNF143 GTRD no Epithelial (MCF-7) 21723243
chr16 85348726 85352067 ZNF143 GTRD no Epithelial (MCF-7) 21723244
chr16 85348742 85349980 ZBTB33 GTRD no Brain (SK-N-SH) 21723245
chr16 85348765 85350026 ZBTB33 GTRD no Brain (SK-N-SH) 21723246
chr16 85348799 85350053 ZBTB33 GTRD no Brain (SK-N-SH) 21723247
chr16 85348809 85349927 ZBTB33 GTRD no Brain (SK-N-SH) 21723248
chr16 85348811 85351800 ZNF143 GTRD no Epithelial (MCF-7) 21723249
chr16 85348942 85350420 ZNF143 GTRD no Epithelial (MCF-7) 21723251
chr16 85349076 85351661 ZNF143 GTRD no Epithelial (MCF-7) 21723253
chr16 85349119 85351547 ZNF143 GTRD no Epithelial (MCF-7) 21723254
chr16 85349140 85351564 ZNF143 GTRD no Epithelial (MCF-7) 21723255
chr16 85349172 85350688 ZNF143 GTRD no Epithelial (MCF-7) 21723256
chr16 85349203 85351445 ZNF143 GTRD no Epithelial (MCF-7) 21723257
chr16 85349206 85350134 ZNF274 GTRD no Bone Marrow (K562) 21723258
chr16 85349213 85351705 ZNF143 GTRD no Epithelial (MCF-7) 21723259
chr16 85349214 85350373 ZNF143 GTRD no Epithelial (MCF-7) 21723260
chr16 85349221 85351658 ZNF143 GTRD no Epithelial (MCF-7) 21723261
chr16 85349249 85351485 ZNF143 GTRD no Epithelial (MCF-7) 21723262
chr16 85349257 85350533 ZNF143 GTRD no Epithelial (MCF-7) 21723263
chr16 85349264 85351405 TCF7L2 GTRD no Colon (HCT116) 21723264
chr16 85349283 85351816 TCF7L2 GTRD no Colon (HCT116) 21723265
chr16 85349285 85351539 ZNF143 GTRD no Epithelial (MCF-7) 21723266
chr16 85349295 85349729 ZNF274 GTRD no Bone Marrow (K562) 21723267
chr16 85349299 85350065 ZNF143 GTRD no Epithelial (MCF-7) 21723268
chr16 85349301 85351652 ZNF143 GTRD no Epithelial (MCF-7) 21723269
chr16 85349311 85349834 TCF7L2 GTRD no Colon (HCT116) 21723270
chr16 85349311 85351318 ZNF143 GTRD no Epithelial (MCF-7) 21723271
chr16 85349317 85351580 ZNF143 GTRD no Epithelial (MCF-7) 21723272
chr16 85349325 85350133 ZNF143 GTRD no Epithelial (MCF-7) 21723273
chr16 85349326 85350752 ZNF143 GTRD no Epithelial (MCF-7) 21723274
chr16 85349344 85350702 ZNF274 GTRD no Bone Marrow (K562) 21723275
chr16 85349346 85349985 TCF7L2 GTRD no Colon (HCT116) 21723276
chr16 85349372 85351593 ZNF143 GTRD no Epithelial (MCF-7) 21723277
chr16 85349382 85350763 ZNF143 GTRD no Epithelial (MCF-7) 21723278
chr16 85349393 85350122 ZNF143 GTRD no Epithelial (MCF-7) 21723279
chr16 85349424 85350000 ZNF143 GTRD no Epithelial (MCF-7) 21723280
chr16 85349451 85350244 ZNF143 GTRD no Epithelial (MCF-7) 21723281
chr16 85349489 85349679 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21723282
chr16 85349526 85350200 ZNF143 GTRD no Epithelial (MCF-7) 21723283
chr16 85349529 85349539 SP1 JASPAR yes 12046364
chr16 85349529 85349539 ZNF740 JASPAR yes 12046365
chr16 85349531 85349541 SP1 JASPAR yes 12046367
chr16 85349532 85349542 MZF1 JASPAR yes 12046368
chr16 85349532 85349542 SP1 JASPAR yes 12046369
chr16 85349532 85349542 ZNF740 JASPAR yes 12046370
chr16 85349532 85349553 ZNF263 JASPAR yes 12046371
chr16 85349533 85349543 SP1 JASPAR yes 12046372
chr16 85349533 85349543 ZNF740 JASPAR yes 12046373
chr16 85349536 85349551 NR2C2 JASPAR yes 12046374
chr16 85349537 85349551 PLAG1 JASPAR yes 12046375
Genes associated with rs4782697[chr16:85349539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More