EnhancerDB
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  3. rs4789002[chr17:75401778]
Enhancers that have rs4789002[chr17:75401778]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 75373666 75445575 enh4617
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4789002[chr17:75401778]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 75401351 75402565 ZNF274 GTRD no Blood (GM12878) 21790393
chr17 75401351 75402565 ZNF274 GTRD no Blood (GM12878) 108298700
chr17 75401385 75402852 ZNF274 GTRD no Blood (GM12878) 21790394
chr17 75401385 75402852 ZNF274 GTRD no Blood (GM12878) 108298701
chr17 75401394 75402827 ZNF274 GTRD no Blood (GM12878) 21790395
chr17 75401394 75402827 ZNF274 GTRD no Blood (GM12878) 108298702
chr17 75401399 75402716 ZNF274 GTRD no Blood (GM12878) 21790396
chr17 75401399 75402716 ZNF274 GTRD no Blood (GM12878) 108298703
chr17 75401498 75402871 ZNF274 GTRD no Bone Marrow (K562) 21790397
chr17 75401498 75402871 ZNF274 GTRD no Bone Marrow (K562) 108298704
chr17 75401766 75401780 GLIS2 JASPAR yes 56077928
chr17 75401766 75401780 GLIS3 JASPAR yes 56077929
chr17 75401774 75401779 SP1 TRANSFAC yes 56077930
Genes associated with rs4789002[chr17:75401778], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More