EnhancerDB
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  3. rs4794910[chr17:25791617]
Enhancers that have rs4794910[chr17:25791617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4794910[chr17:25791617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25791606 25791624 ESR1 JASPAR yes 53632610
chr17 25791614 25791623 ZEB1 JASPAR yes 53632611
chr17 25791614 25791629 SCRT1 JASPAR yes 53632612
chr17 25791615 25791625 FIGLA JASPAR yes 53632613
chr17 25791615 25791625 ID4 JASPAR yes 53632614
chr17 25791615 25791625 MSC JASPAR yes 53632615
chr17 25791615 25791625 MYF6 JASPAR yes 53632616
chr17 25791615 25791625 TCF3 JASPAR yes 53632617
chr17 25791615 25791625 TCF4 JASPAR yes 53632618
chr17 25791616 25791625 SNAI2 JASPAR yes 53632619
chr17 25791616 25791629 SCRT2 JASPAR yes 53632620
chr17 25791617 25791622 USF2 TRANSFAC yes 53632621
Genes associated with rs4794910[chr17:25791617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 26662628 26674035 + TNFAIP1 ENSG00000109079.5 26662628 871011 Spleen 0.0440856 15564