EnhancerDB
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  3. rs4844825[chr1:209594588]
Enhancers that have rs4844825[chr1:209594588]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209568193 209597635 enh12617
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Colon (HCT116) Uterus Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Breast Spleen Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs4844825[chr1:209594588]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209593856 209594909 ZNF143 GTRD no Epithelial (MCF-7) 21375398
chr1 209594168 209594760 ZNF143 GTRD no Epithelial (MCF-7) 21375403
chr1 209594215 209594821 ZNF143 GTRD no Epithelial (MCF-7) 21375404
chr1 209594240 209594786 ZNF143 GTRD no Epithelial (MCF-7) 21375405
chr1 209594434 209594780 ZNF143 GTRD no Epithelial (MCF-7) 21375406
chr1 209594488 209594737 ZNF143 GTRD no Epithelial (MCF-7) 21375407
chr1 209594490 209594792 ZBTB33 GTRD no Lung (A549) 21375408
chr1 209594515 209594769 ZBTB33 GTRD no Lung (A549) 21375409
chr1 209594575 209594590 PRDM1 JASPAR yes 34974388
chr1 209594582 209594596 RORA JASPAR yes 34974389
chr1 209594588 209594594 ESR1 TRANSFAC yes 34974390
Genes associated with rs4844825[chr1:209594588], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More