EnhancerDB
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  3. rs486650[chr1:234819885]
Enhancers that have rs486650[chr1:234819885]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234809879 234823595 enh12794
Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Lung (PC-9) Bone (Osteoblast) Stomach Placenta Adrenal Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Epithelial (MCF-7)
Transcript factors that have rs486650[chr1:234819885]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234819780 234820460 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395729
chr1 234819797 234820447 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395730
chr1 234819821 234820385 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395731
chr1 234819828 234820444 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395732
chr1 234819852 234820368 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395733
chr1 234819867 234820243 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21395734
chr1 234819875 234819888 SMAD2 JASPAR yes 36302432
chr1 234819876 234820340 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395735
chr1 234819881 234819902 IRF1 JASPAR yes 36302433
chr1 234819883 234819898 STAT2 JASPAR yes 36302434
chr1 234819883 234819903 RREB1 JASPAR yes 36302435
chr1 234819885 234819897 IRF1 JASPAR yes 36302436
Genes associated with rs486650[chr1:234819885], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More