EnhancerDB
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  3. rs4890099[chr17:39056313]
Enhancers that have rs4890099[chr17:39056313]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs4890099[chr17:39056313]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39056197 39057414 ZBTB33 GTRD no Lung (A549) 21757019
chr17 39056201 39057909 ZBTB33 GTRD no Lung (A549) 21757020
chr17 39056293 39057572 ZBTB33 GTRD no Lung (A549) 21757021
Genes associated with rs4890099[chr17:39056313], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 38296571 38328436 + CASC3 ENSG00000108349.10 38296571 727877 Ovary 0.430265 15760