EnhancerDB
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Enhancers that have rs4890100[chr17:39056666]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs4890100[chr17:39056666]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39056197 39057414 ZBTB33 GTRD no Lung (A549) 21757019
chr17 39056201 39057909 ZBTB33 GTRD no Lung (A549) 21757020
chr17 39056293 39057572 ZBTB33 GTRD no Lung (A549) 21757021
chr17 39056362 39057983 ZBTB33 GTRD no Lung (A549) 21757022
chr17 39056421 39057790 ZNF274 GTRD no Liver (HepG2) 21757023
chr17 39056424 39057461 ZNF274 GTRD no Cervix (HeLa-S3) 21757024
chr17 39056458 39057513 ZNF274 GTRD no Liver (HepG2) 21757025
chr17 39056462 39057317 ZNF274 GTRD no Cervix (HeLa-S3) 21757026
chr17 39056466 39057424 ZNF274 GTRD no Liver (HepG2) 21757027
chr17 39056479 39057471 TCF7L2 GTRD no Colon (HCT116) 21757028
chr17 39056530 39057273 ZNF274 GTRD no Cervix (HeLa-S3) 21757029
chr17 39056536 39057407 ZBTB33 GTRD no Lung (A549) 21757030
chr17 39056593 39057374 ZNF274 GTRD no Cervix (HeLa-S3) 21757031
chr17 39056597 39057620 ZNF274 GTRD no Cervix (HeLa-S3) 21757032
chr17 39056599 39057779 ZBTB33 GTRD no Lung (A549) 21757033
chr17 39056610 39057298 ZNF274 GTRD no Cervix (HeLa-S3) 21757034
chr17 39056621 39057335 ZNF274 GTRD no Liver (HepG2) 21757035
chr17 39056626 39057422 ZNF274 GTRD no Cervix (HeLa-S3) 21757036
chr17 39056632 39057805 ZNF143 GTRD no Epithelial (MCF-7) 21757037
chr17 39056634 39057382 ZNF274 GTRD no Liver (HepG2) 21757038
chr17 39056647 39057267 ZNF143 GTRD no Epithelial (MCF-7) 21757039
chr17 39056655 39057311 ZNF143 GTRD no Epithelial (MCF-7) 21757040
chr17 39056664 39056669 MYB TRANSFAC yes 54241733
Genes associated with rs4890100[chr17:39056666], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More