EnhancerDB
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  3. rs4890117[chr17:38778488]
Enhancers that have rs4890117[chr17:38778488]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 38750565 38781175 enh17142
Brain (SK-N-MC) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs4890117[chr17:38778488]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 38778479 38778491 TEAD1 JASPAR yes 54233466
chr17 38778481 38778491 TEAD1 JASPAR yes 54233467
chr17 38778481 38778491 TEAD4 JASPAR yes 54233468
Genes associated with rs4890117[chr17:38778488], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr17 38781214 38804760 - SMARCE1 ENSG00000073584.14 38804760 2726 Esophagus 5.98568e-11 15771