EnhancerDB
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  3. rs4908342[chr1:27906802]
Enhancers that have rs4908342[chr1:27906802]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27879543 27929405 enh11668
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs4908342[chr1:27906802]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27906789 27906805 GLIS1 JASPAR yes 27711786
chr1 27906790 27906804 GLIS2 JASPAR yes 27711787
chr1 27906800 27906804 ESR1 TRANSFAC yes 27711788
chr1 27906800 27906811 USF1 JASPAR yes 27711789
chr1 27906801 27906811 TFE3 JASPAR yes 27711790
chr1 27906801 27906811 TFEB JASPAR yes 27711791
Genes associated with rs4908342[chr1:27906802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More