EnhancerDB
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  3. rs4924417[chr15:40366939]
Enhancers that have rs4924417[chr15:40366939]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 40353665 40379655 enh16061
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs4924417[chr15:40366939]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 40366605 40367313 ZBTB33 GTRD no Brain (SK-N-SH) 21649884
chr15 40366615 40366988 ZBTB33 GTRD no Brain (SK-N-SH) 21649885
chr15 40366652 40367090 ZBTB33 GTRD no Brain (SK-N-SH) 21649886
chr15 40366676 40367239 ZBTB33 GTRD no Brain (SK-N-SH) 21649887
chr15 40366720 40368771 TCF7L2 GTRD no Colon (HCT116) 21649888
chr15 40366783 40369415 TCF7L2 GTRD no Colon (HCT116) 21649889
chr15 40366811 40368964 TCF7L2 GTRD no Colon (HCT116) 21649890
chr15 40366839 40368087 AR GTRD no Prostate (PC-3) 21649891
chr15 40366846 40368701 TCF7L2 GTRD no Colon (HCT116) 21649892
chr15 40366929 40366948 CTCF JASPAR yes 22926818
chr15 40366929 40369193 ZNF274 GTRD no Bone Marrow (K562) 21649893
chr15 40366934 40366943 SNAI2 JASPAR yes 22926819
chr15 40366934 40366944 TCF3 JASPAR yes 22926820
Genes associated with rs4924417[chr15:40366939], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More