EnhancerDB
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  3. rs494971[chr6:13405553]
Enhancers that have rs494971[chr6:13405553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13393585 13416889 enh8961
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs494971[chr6:13405553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13405553 13405563 ALX3 JASPAR yes 100026554
chr6 13405553 13405563 EMX1 JASPAR yes 100026555
chr6 13405553 13405563 EMX2 JASPAR yes 100026556
chr6 13405553 13405563 ESX1 JASPAR yes 100026557
chr6 13405553 13405563 GSX1 JASPAR yes 100026558
chr6 13405553 13405563 GSX2 JASPAR yes 100026559
chr6 13405553 13405563 HESX1 JASPAR yes 100026560
chr6 13405553 13405563 LBX2 JASPAR yes 100026561
chr6 13405553 13405563 LHX2 JASPAR yes 100026562
chr6 13405553 13405563 LHX6 JASPAR yes 100026563
chr6 13405553 13405563 MIXL1 JASPAR yes 100026564
chr6 13405553 13405563 MNX1 JASPAR yes 100026565
chr6 13405553 13405563 NOTO JASPAR yes 100026566
chr6 13405553 13405563 POU6F1 JASPAR yes 100026567
chr6 13405553 13405563 RAX JASPAR yes 100026568
Genes associated with rs494971[chr6:13405553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More