EnhancerDB
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  3. rs4950989[chr1:205282979]
Enhancers that have rs4950989[chr1:205282979]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 205280105 205289755 enh12590
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Heart
Transcript factors that have rs4950989[chr1:205282979]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 205282529 205283119 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861943
chr1 205282538 205283058 TCF7L2 GTRD no Colon (HCT116) 21371756
chr1 205282538 205283058 TCF7L2 GTRD no Colon (HCT116) 107861944
chr1 205282612 205283042 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861945
chr1 205282650 205283170 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861946
chr1 205282658 205283318 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861947
chr1 205282683 205283259 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861948
chr1 205282698 205283238 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107861949
chr1 205282704 205283224 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861950
chr1 205282745 205283125 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861951
chr1 205282748 205283038 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861952
chr1 205282783 205283043 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861953
chr1 205282802 205283122 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861954
chr1 205282802 205283132 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861955
chr1 205282809 205283189 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861956
chr1 205282822 205283142 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861957
chr1 205282829 205283185 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861958
chr1 205282861 205283159 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861959
chr1 205282888 205283213 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861960
chr1 205282888 205283217 EBF1 UCSC Txn Factor no Conserved 107861961
chr1 205282889 205283093 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107861962
chr1 205282897 205283080 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107861963
chr1 205282899 205283269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21371757
chr1 205282899 205283269 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107861964
Genes associated with rs4950989[chr1:205282979], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0 Esophagus 0.0304604 1762
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0 Breast 0.00393085 1762
chr1 205271187 205290883 - NUAK2 ENSG00000163545.7 205290883 0 Ovary 0.120781 1762