EnhancerDB
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  3. rs4971240[chr1:203488951]
Enhancers that have rs4971240[chr1:203488951]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203471885 203497995 enh12556
Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs4971240[chr1:203488951]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203488446 203489016 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369200
chr1 203488615 203489119 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21369205
chr1 203488676 203488986 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21369206
chr1 203488930 203488951 ZNF263 JASPAR yes 34634837
chr1 203488932 203488953 IRF1 JASPAR yes 34634838
chr1 203488933 203488954 ZNF263 JASPAR yes 34634840
chr1 203488936 203488951 PRDM1 JASPAR yes 34634841
chr1 203488941 203488954 SMAD2 JASPAR yes 34634842
Genes associated with rs4971240[chr1:203488951], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More